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GUIDELINES FOR CATALOGUE PRODUCTION
Data input & authentication for
genomic libraries |

|
Data Sets
Data entry and validation
Library Name
|
Field |
Library Name |
|
Description |
library Identifier e.g. WI/MIT, RCPI1 |
|
Input Process |
Ensure Every Library has Unique identifier,
New Library as given by depositor. |
|
Required for |
MDS |
Organism
|
Field |
Organism |
|
Description |
The Organism represented in the Library |
|
Input Process |
CABRI agreed list (Note: may have multiple species):
| Organism |
|
Synonym |
| Mouse |
|
Murine, Mus Musculus |
| Human |
|
Homo Sapiens |
| Rat |
|
|
| Fugu |
|
|
| Drosophila |
|
|
| Dog |
|
Canine |
|
Required for |
MDS |
|
Type of Library
|
Field |
Type |
|
Description |
Type of Library |
|
Input Process |
CABRI agreed list:
PAC
BAC
YAC
PI
cDNA |
|
Required for |
MDS |
Vector
|
Field |
Vector |
|
Description |
Vector name , more specific than type as will be specific about vector e.g. pCYPAC, Lawrist4 |
|
Input Process |
Supplied by depositor, may have multiple vectors per library |
|
Required for |
MDS |
Insert Size
|
Field |
Insert Size |
|
Description |
Average size of inserts in vector in Kb |
|
Input Process |
Numeric entry |
|
Required for |
MDS |
Library coverage
|
Field |
Library coverage |
|
Description |
Degree of coverage |
|
Input Process |
Numeric entry |
|
Required for |
MDS |
MTA required
|
Field |
MTA required |
|
Description |
Is a material Transfer Agreement required |
|
Input Process |
"Yes" or "No" |
|
Required for |
MDS |
|
Guidelines prepared for CABRI by BCCM, CBS, CERDIC, DSMZ, ECACC, HGMP, INRC, MSDN
Page layout by CERDIC
Copyright CABRI, 1998 |
© The CABRI Consortium 1999-2012.
This work cannot be reproduced in whole or in part without the express
written permission of the CABRI consortium.
Site maintained by Paolo Romano. Last revised on January 2012.
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