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Last revised: January 2020
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Cabri Search Fields
Unique Identifier
The Unique Identifier field contains the unique identifiers of each
catalogue e.g. accession number.
Accession numbers are indexed as complete entities.
Thus to find the accession number e.g. LMG 12345
it is necessary to include the LMG part of the number
as well as the number itself, i.e. searching for 12345
alone will not produce a valid result (unless using a wildcard of course).
In some cases, this field will also search for Accession Numbers used
in other collections.
It includes for each database :-
Animal and Human Cell Lines Catalogues
-
DSMZ_MUTZ
-
Accession_number,
e.g. ACC 123
-
ICLC
-
Accession_number,
e.g. ICLC XYZ12345
Bacteria Catalogues
-
BCCM_LMG
-
Strain_number,
e.g. LMG 12345, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
-
CABI_BACT
-
Strain_number,
e.g. IMI 123456, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
-
CBS_BACT
-
Strain_number,
e.g. CBS 123.12, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
-
CIP_BACT
-
Strain_number,
e.g. 123456, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
-
DSMZ_BACT
-
Strain_number,
e.g. DSM 12345, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
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NCCB_BACT
-
Strain_number,
e.g. NCCB 1234, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
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NCIMB_BACT
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Strain_number,
e.g. NCIMB 1234, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
Filamentous Fungi and Yeasts Catalogues
-
BCCM_IHEM
-
Collection Number - Of the form e.g. IHEM 1234
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BCCM_MUCL
-
Strain_number,
e.g. 1234,
Other_numbers
(collections' acronyms followed by relative identification number)
-
CABI_FIL
-
Strain_number,
e.g. IMI 123456, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
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CABI_YEAST
-
Strain_number,
e.g. IMI 123456, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
-
CBS_FIL
-
Strain_number,
e.g. CBS 123.12, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
-
CBS_YEAST
-
Strain_number,
e.g. CBS 1234, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
-
DSMZ_FUNGI
-
Strain_number,
e.g. DSM 12345, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
Plasmids Catalogues
-
BCCM_LMBP
-
Collection_number,
e.g. LMBP 1234, and
Other_culture_collection_numbers
(collections' acronyms followed by relative identification number)
-
DSMZ_PLASMID
-
Collection_number,
e.g. DSM 12345, and
Other_culture_collection_numbers
(collections' acronyms followed by relative identification number)
-
NCCB_PLASMID
-
Collection_number,
e.g. PC V1234, and
Other_culture_collection_numbers
(collections' acronyms followed by relative identification number)
Plant Cells Catalogues
-
DSMZ_PLANT_CELL
-
Collection_number,
e.g. DSM PC-1234, and
Strain_designation
Viruses Catalogues
-
DSMZ_PHAGES
-
Collection_number,
e.g. DSM 12345,
Name
and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
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NCCB_PHAGES
-
Collection_number,
e.g. NCCB 1234, and
Other_collection_numbers
(collections' acronyms followed by relative identification number)
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DSMZ_PLANT_VIRUSES
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Accession_number,
e.g. DSMZ PV-1234
Name
The Name field contains the actual name of the strain/cell,
if it is available.
It includes for each database :-
Animal and Human Cell Lines Catalogues
-
DSMZ_MUTZ
-
Cell_line_name
-
ICLC
-
Cell_line_name
Bacteria Catalogues
-
BCCM_LMG
-
Name
(including Full scientific and most recent name of the strain) and
Other_names (names used in the past)
-
CABI_BACT
-
Name
(including Full scientific and most recent name of the strain)
-
CBS_BACT
-
Name
(including Full scientific and most recent name of the strain) and
Other_names (names used in the past)
-
CIP_BACT
-
Name
(including Full scientific and most recent name of the strain)
-
DSMZ_BACT
-
Name
(including Full scientific and most recent name of the strain) and
Other_names (names used in the past)
-
NCCB_BACT
-
Name
(including Full scientific and most recent name of the strain) and
Other_names (names used in the past)
-
NCIMB_BACT
-
Name
(including Full scientific and most recent name of the strain) and
Other_names (names used in the past)
Filamentous Fungi and Yeasts Catalogues
-
BCCM_IHEM
-
Name
-
BCCM_MUCL
-
Name
(including Full scientific and most recent name of the strain) and
Misapplied_names
-
CABI_FIL
-
Name
(including Full scientific and most recent name of the strain)
-
CABI_YEAST
-
Name
(including Full scientific and most recent name of the strain)
-
CBS_FIL
-
Name
(including Full scientific and most recent name of the strain) and
Misapplied_names
-
CBS_YEAST
-
Name
(including Full scientific and most recent name of the strain)
-
DSMZ_FUNGI
-
Name
(including Full scientific and most recent name of the strain) and
Misapplied_names
Plasmids Catalogues
-
BCCM_LMBP
-
Name
-
DSMZ_PLASMID
-
Name
-
NCCB_PLASMID
-
Name
Plant Cells Catalogues
-
DSMZ_PLANT_CELL
-
Scientific_name
Viruses Catalogues
-
DSMZ_PHAGES
-
Host_used_for_propagation
-
DSMZ_PLANT_VIRUSES
-
Virus_name,
Virus_name_abbreviation and
Former_name
(all fields according to
ICTV, 1995)
-
NCCB_PHAGES
-
Name
When searching on a name, checking the "Include synonyms of Name in search"
checkbox and then searching will perform a preliminary search of that name on
a database of synonyms. If it is found that the name entered is in fact a
synonym (or, in the case of fungi, an alternate state or a synonym of an
alternate state), then the correct name will be extracted from the synonym
database and included in the search along with the original term entered
and any results will be returned as normal.
At present, all bacteria, yeasts and fungi catalogues,
but BCCM_IHEM, have synonym data.
Upon performing a search, the name of the organism returned will contain
a link to the relevant synonym database (if it has one). If a synonym is
present, clicking on the link will display it, however, if no synonym
information is present, the link will be an invalid one and return
an error.
Other Fields
The Other Information field contains all other information from each
catalogue (indexed under the field name "AllFields").
A list of all fields is available for each catalogue :-
Animal and Human Cell Lines Catalogues
DSMZ_MUTZ
ICLC
Bacteria Catalogues
BCCM_LMG
CABI_BACT
CBS_BACT
CIP_BACT
DSMZ_BACT
NCCB_BACT
NCIMB_BACT
Filamentous Fungi and Yeasts Catalogues
BCCM_IHEM
BCCM_MUCL
CABI_FIL
CABI_YEAST
CBS_FIL
CBS_YEAST
DSMZ_FUNGI
Plasmids Catalogues
BCCM_LMBP
DSMZ_PLASMID
NCCB_PLASMID
Plant Cells Catalogues
DSMZ_PLANT_CELL
Viruses Catalogues
DSMZ_PHAGES
DSMZ_PLANT_VIRUSES
NCCB_PHAGES
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© The CABRI Consortium 1999-2020.
This work cannot be reproduced in whole or in part without the express written permission of the CABRI consortium.
Site maintained by Paolo Romano.
Last revised in January 2020.
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